{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 83513764, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 55275397, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 66.19, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 31878395, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26676137, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 83.68, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 49732296, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1879079, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.037784
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 22743580, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 280884, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.01235
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 49722244, 
            "distinct_read_pairs": 48269486, 
            "one_read_pair": 46886104, 
            "two_read_pair": 1321329, 
            "NRF": 0.970783, 
            "PBC1": 0.97134, 
            "PBC2": 35.48405
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 22717514, 
            "distinct_read_pairs": 22500989, 
            "one_read_pair": 22308339, 
            "two_read_pair": 186869, 
            "NRF": 0.990469, 
            "PBC1": 0.991438, 
            "PBC2": 119.37956
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 47853217, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 47853217, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 22462696, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 22462696, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 54444, 
        "Np": 0, 
        "N_opt": 54444, 
        "N_consv": 54444, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 225, 
            "corr_est_frag_len": 0.190653065882996, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1910626, 
            "argmin_corr": 1500, 
            "min_corr": 0.174088, 
            "NSC": 1.095154, 
            "RSC": 0.9758717
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.180828701236
        }, 
        "rep1-pr1": {
            "FRiP": 0.187380449417
        }, 
        "rep1-pr2": {
            "FRiP": 0.187129016983
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.171060310845
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.247960482412, 
            "auc": 0.494069208361, 
            "ch_div": 0.114739841056, 
            "elbow_pt": 8.03551208089e-244, 
            "jsd": 0.648477033038, 
            "syn_auc": 0.509711208885, 
            "syn_elbow_pt": 0.174532392281, 
            "syn_jsd": 0.334480344608
        }
    ]
}