{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 283693443, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 238190820, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 83.96, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 35643447, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30490485, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 85.54, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 169397532, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 34806476, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.205472
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 23787802, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 498336, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.020949
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 169302285, 
            "distinct_read_pairs": 141332203, 
            "one_read_pair": 118860219, 
            "two_read_pair": 18226129, 
            "NRF": 0.834792, 
            "PBC1": 0.840999, 
            "PBC2": 6.521419
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 23765198, 
            "distinct_read_pairs": 23321286, 
            "one_read_pair": 22903741, 
            "two_read_pair": 401705, 
            "NRF": 0.981321, 
            "PBC1": 0.982096, 
            "PBC2": 57.01632
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 134591056, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 134591056, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 23289466, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 23289466, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 56890, 
        "Np": 0, 
        "N_opt": 56890, 
        "N_consv": 56890, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 115, 
            "corr_est_frag_len": 0.188247971393426, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1883906, 
            "argmin_corr": 1500, 
            "min_corr": 0.1706499, 
            "NSC": 1.103124, 
            "RSC": 0.9919578
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0865501929402
        }, 
        "rep1-pr1": {
            "FRiP": 0.091952807439
        }, 
        "rep1-pr2": {
            "FRiP": 0.092129730872
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0811769963276
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.248357822134, 
            "auc": 0.494945784593, 
            "ch_div": 0.113785947347, 
            "elbow_pt": 0.0, 
            "jsd": 0.617282716484, 
            "syn_auc": 0.502291455146, 
            "syn_elbow_pt": 0.122395165532, 
            "syn_jsd": 0.330803445359
        }
    ]
}
