/EXTERNAL Roadmap/K006542_K006543_K006544_K006545_4_lane_gembs

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SAMPLE K006542_K006543_K006544_K006545_4_lane_gembs




Mapping Stats (Reads)

Concept Total Reads %
Sequenced Reads 1538561338 100.00 %
General Reads 1505046647 97.82 %
Reads in Control sequences 0 0.00 %
Reads under conversion control 6560763 0.43 %
Reads over conversion control 0 0.00 %
Unmapped reads 26953928 1.75 %
Bisulfite_reads C2T 772475146 50.21 %
Bisulfite_reads G2A 739132264 48.04 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 1262996999
Average Unique 83.55 %



Mapping Stats (Bases)

Concept Total Bases %
Base Counts Overall A 41174856088 28.37 %
Base Counts Overall C 1985437999 1.37 %
Base Counts Overall G 35571883747 24.51 %
Base Counts Overall T 64572479058 44.50 %
Base Counts Overall N 1810062053 1.25 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9932874654074341
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
K006542_K006543_K006544_K006545_4_lane_gembs.mapq.png



Mapping Lanes Reports

LANE REPORTS
SRX056690_1_lanes
SRX056687_20_lanes
SRX056688_12_lanes
SRX056689_1_lanes