/EXTERNAL Roadmap/K006542_K006543_K006544_K006545_4_lane_gembs/SRX056687_20_lanes

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SAMPLE K006542_K006543_K006544_K006545_4_lane_gembs LANE SRX056687_20_lanes

Mapping Stats (Reads)

Concept	Total Reads	%	Pair One Reads	%	Pair Two Reads	%
Sequenced Reads	857831674	100.00 %	857831674	100.00 %	0	0.00 %
General Reads	838674678	97.77 %	838674678	97.77 %	0	0.00 %
Reads in Control sequences	0	0.00 %	0	0.00 %	0	0.00 %
Reads under conversion control	3600512	0.42 %	3600512	0.42 %	0	0.00 %
Reads over conversion control	0	0.00 %	0	0.00 %	0	0.00 %
Unmapped reads	15556484	1.81 %	15556484	1.81 %	0	0.00 %
Bisulfite_reads C2T	430250166	50.16 %	430250166	50.16 %	0	0.00 %
Bisulfite_reads G2A	412025024	48.03 %	412025024	48.03 %	0	0.00 %

Uniqueness (Fragments)

Concept	Value
Unique Fragments	702981825
Average Unique	83.46 %

Mapping Stats (Bases)

Concept	Total Bases	%	Pair One Bases	%	Pair Two Bases	%
Base Counts Overall A	22975414192	28.52 %
Base Counts Overall C	1094104942	1.36 %
Base Counts Overall G	19650822628	24.40 %
Base Counts Overall T	35821466022	44.47 %
Base Counts Overall N	1010126041	1.25 %

Bisulfite Conversion Rate

Bisulfite Conversion Type	Conversion Rate
Conversion Rate	0.9931701691450464
Over Conversion Rate	NA

Mapping Quality

Mapping Quality Histogram

Read Length

Read Length	Reads
101	281879244
85	236352673
108	87670100
86	251929657