/EXTERNAL Roadmap/K006542_K006543_K006544_K006545_4_lane_gembs/SRX056688_12_lanes

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SAMPLE K006542_K006543_K006544_K006545_4_lane_gembs LANE SRX056688_12_lanes

Mapping Stats (Reads)

Concept	Total Reads	%	Pair One Reads	%	Pair Two Reads	%
Sequenced Reads	613416476	100.00 %	613416476	100.00 %	0	0.00 %
General Reads	600116968	97.83 %	600116968	97.83 %	0	0.00 %
Reads in Control sequences	0	0.00 %	0	0.00 %	0	0.00 %
Reads under conversion control	2734624	0.45 %	2734624	0.45 %	0	0.00 %
Reads over conversion control	0	0.00 %	0	0.00 %	0	0.00 %
Unmapped reads	10564884	1.72 %	10564884	1.72 %	0	0.00 %
Bisulfite_reads C2T	308382732	50.27 %	308382732	50.27 %	0	0.00 %
Bisulfite_reads G2A	294468860	48.00 %	294468860	48.00 %	0	0.00 %

Uniqueness (Fragments)

Concept	Value
Unique Fragments	504140138
Average Unique	83.63 %

Mapping Stats (Bases)

Concept	Total Bases	%	Pair One Bases	%	Pair Two Bases	%
Base Counts Overall A	16503443656	28.08 %
Base Counts Overall C	824210424	1.40 %
Base Counts Overall G	14571138749	24.79 %
Base Counts Overall T	26142521243	44.48 %
Base Counts Overall N	732536880	1.25 %

Bisulfite Conversion Rate

Bisulfite Conversion Type	Conversion Rate
Conversion Rate	0.9932755527110099
Over Conversion Rate	NA

Mapping Quality

Mapping Quality Histogram

Read Length

Read Length	Reads
101	376252126
85	237164350