{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 91631618, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 64451784, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 70.34, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 55088809, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 46902752, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 85.14, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 46746132, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 4879564, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.104384
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 32490714, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 498377, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.015339
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 46726517, 
            "distinct_read_pairs": 42585142, 
            "one_read_pair": 39240715, 
            "two_read_pair": 2737001, 
            "NRF": 0.91137, 
            "PBC1": 0.921465, 
            "PBC2": 14.337121
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 32383515, 
            "distinct_read_pairs": 32032021, 
            "one_read_pair": 31693614, 
            "two_read_pair": 332169, 
            "NRF": 0.989146, 
            "PBC1": 0.989435, 
            "PBC2": 95.414124
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 41866568, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 41866568, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 31992337, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 31992337, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 27252, 
        "Np": 0, 
        "N_opt": 27252, 
        "N_consv": 27252, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 140, 
            "corr_est_frag_len": 0.270458267286993, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.2501215, 
            "argmin_corr": 1500, 
            "min_corr": 0.16748, 
            "NSC": 1.614869, 
            "RSC": 1.246084
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.283614442657
        }, 
        "rep1-pr1": {
            "FRiP": 0.284935994208
        }, 
        "rep1-pr2": {
            "FRiP": 0.284917932979
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.280932302454
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.181010875561, 
            "auc": 0.490931772877, 
            "ch_div": 0.170218083235, 
            "elbow_pt": 1.69444600919e-103, 
            "jsd": 0.716679728735, 
            "syn_auc": 0.513690487568, 
            "syn_elbow_pt": 0.296327789725, 
            "syn_jsd": 0.441663492252
        }
    ]
}