/EXTERNAL Roadmap/K006546_K006547_2_lane_gembs/SRX056691_13_lanes

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SAMPLE K006546_K006547_2_lane_gembs LANE SRX056691_13_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 690795046 100.00 % 690795046 100.00 % 0 0.00 %
General Reads 675378961 97.77 % 675378961 97.77 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 2541061 0.37 % 2541061 0.37 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 12875024 1.86 % 12875024 1.86 % 0 0.00 %
Bisulfite_reads C2T 346192711 50.12 % 346192711 50.12 % 0 0.00 %
Bisulfite_reads G2A 331727311 48.02 % 331727311 48.02 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 563755211
Average Unique 83.16 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 19435459559 28.87 %
Base Counts Overall C 954629600 1.42 %
Base Counts Overall G 16454104118 24.44 %
Base Counts Overall T 29784233411 44.24 %
Base Counts Overall N 701438541 1.04 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9911040904640851
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX056691_13_lanes.mapq.png



Read Length

Read Length Reads
101 372947658
85 232876573
108 84970815