/EXTERNAL Roadmap/K006546_K006547_2_lane_gembs/SRX056692_11_lanes

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SAMPLE K006546_K006547_2_lane_gembs LANE SRX056692_11_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 524861407 100.00 % 524861407 100.00 % 0 0.00 %
General Reads 513920028 97.92 % 513920028 97.92 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 1965077 0.37 % 1965077 0.37 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 8976302 1.71 % 8976302 1.71 % 0 0.00 %
Bisulfite_reads C2T 263674909 50.24 % 263674909 50.24 % 0 0.00 %
Bisulfite_reads G2A 252210196 48.05 % 252210196 48.05 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 428775267
Average Unique 83.11 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 14322683866 28.89 %
Base Counts Overall C 683240099 1.38 %
Base Counts Overall G 12135177833 24.48 %
Base Counts Overall T 21899182685 44.17 %
Base Counts Overall N 534762391 1.08 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9926068626841408
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX056692_11_lanes.mapq.png



Read Length

Read Length Reads
101 277310367
85 247551040