/cemt/A54762_3_lane_gembs

BACK

SAMPLE A54762_3_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1384123810 100.00 % 692061905 100.00 % 692061905 100.00 %
General Reads 1322583804 95.55 % 662804429 95.77 % 659779375 95.34 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 36137607 2.61 % 18095841 2.61 % 18041766 2.61 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 25402399 1.84 % 11161635 1.61 % 14240764 2.06 %
Bisulfite_reads C2T 693775840 50.12 % 347632262 50.23 % 346143578 50.02 %
Bisulfite_reads G2A 664945571 48.04 % 333268008 48.16 % 331677563 47.93 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 481736235
Average Unique 69.61 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 68967388135 39.55 % 32576591551 37.36 % 36390796584 41.73 %
Base Counts Overall C 17932970223 10.28 % 792126035 0.91 % 17140844188 19.66 %
Base Counts Overall G 18474569813 10.59 % 17419925435 19.98 % 1054644378 1.21 %
Base Counts Overall T 67584174217 38.75 % 35703431616 40.94 % 31880742601 36.56 %
Base Counts Overall N 1440497672 0.83 % 707725393 0.81 % 732772279 0.84 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9928445994953378
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 558591812



Mapping Quality

Mapping Quality Histogram
A54762_3_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A54762_3_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
C7NYNANXX_2_1
C7NYNANXX_1_1
C7NH9ANXX_3_1