/cemt/A54762_3_lane_gembs/C7NH9ANXX_3_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 579581162 | 100.00 % | 289790581 | 100.00 % | 289790581 | 100.00 % |
| General Reads | 552778571 | 95.38 % | 276888120 | 95.55 % | 275890451 | 95.20 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 15006987 | 2.59 % | 7501589 | 2.59 % | 7505398 | 2.59 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 11795604 | 2.04 % | 5400872 | 1.86 % | 6394732 | 2.21 % |
| Bisulfite_reads C2T | 289845982 | 50.01 % | 145158768 | 50.09 % | 144687214 | 49.93 % |
| Bisulfite_reads G2A | 277939576 | 47.96 % | 139230941 | 48.05 % | 138708635 | 47.87 % |
| Concept | Value |
|---|---|
| Unique Fragments | 202034113 |
| Average Unique | 69.72 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 28831711160 | 39.48 % | 13668995440 | 37.44 % | 15162715720 | 41.53 % |
| Base Counts Overall C | 7538583782 | 10.32 % | 343704323 | 0.94 % | 7194879459 | 19.70 % |
| Base Counts Overall G | 7670384721 | 10.50 % | 7234819195 | 19.81 % | 435565526 | 1.19 % |
| Base Counts Overall T | 28391003682 | 38.88 % | 14963904756 | 40.98 % | 13427098926 | 36.77 % |
| Base Counts Overall N | 595543067 | 0.82 % | 302189492 | 0.83 % | 293353575 | 0.80 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9923594148776417 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 233436865 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 289790581 |
| 125 | 289790581 |
| Insert Size Histogram |
|---|
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