{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 152493968, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 143236301, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.93, 
            "paired": 152493968, 
            "paired_qc_failed": 0, 
            "read1": 76246984, 
            "read1_qc_failed": 0, 
            "read2": 76246984, 
            "read2_qc_failed": 0, 
            "paired_properly": 141006660, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 92.47, 
            "with_itself": 142216175, 
            "with_itself_qc_failed": 0, 
            "singletons": 1020126, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.67, 
            "diff_chroms": 552106, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 134911976, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 131561749, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.52, 
            "paired": 134911976, 
            "paired_qc_failed": 0, 
            "read1": 67455988, 
            "read1_qc_failed": 0, 
            "read2": 67455988, 
            "read2_qc_failed": 0, 
            "paired_properly": 129326590, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.86, 
            "with_itself": 130892791, 
            "with_itself_qc_failed": 0, 
            "singletons": 668958, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.5, 
            "diff_chroms": 887675, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 60879717, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 396699, 
            "paired_opt_dupes": 867, 
            "dupes_pct": 0.006516
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 56598486, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 240623, 
            "paired_opt_dupes": 1949, 
            "dupes_pct": 0.004251
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 60873813, 
            "distinct_read_pairs": 60477146, 
            "one_read_pair": 60083656, 
            "two_read_pair": 390358, 
            "NRF": 0.993484, 
            "PBC1": 0.993494, 
            "PBC2": 153.919366
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 56554856, 
            "distinct_read_pairs": 56314799, 
            "one_read_pair": 56075865, 
            "two_read_pair": 237833, 
            "NRF": 0.995755, 
            "PBC1": 0.995757, 
            "PBC2": 235.778319
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 120966036, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 120966036, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 120966036, 
            "paired_qc_failed": 0, 
            "read1": 60483018, 
            "read1_qc_failed": 0, 
            "read2": 60483018, 
            "read2_qc_failed": 0, 
            "paired_properly": 120966036, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 120966036, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 112715726, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 112715726, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 112715726, 
            "paired_qc_failed": 0, 
            "read1": 56357863, 
            "read1_qc_failed": 0, 
            "read2": 56357863, 
            "read2_qc_failed": 0, 
            "paired_properly": 112715726, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 112715726, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 130110, 
        "Np": 0, 
        "N_opt": 130110, 
        "N_consv": 130110, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 145, 
            "corr_est_frag_len": 0.182250418373808, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2017421, 
            "argmin_corr": 1500, 
            "min_corr": 0.1745458, 
            "NSC": 1.044141, 
            "RSC": 0.2832963
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.168406106055
        }, 
        "rep1-pr1": {
            "FRiP": 0.162631974643
        }, 
        "rep1-pr2": {
            "FRiP": 0.162798814521
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0888003018925
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.281729728735, 
            "auc": 0.496300304448, 
            "ch_div": 0.100432429623, 
            "elbow_pt": 0.0, 
            "jsd": 0.58843215773, 
            "syn_auc": 0.505381086835, 
            "syn_elbow_pt": 0.0939392557195, 
            "syn_jsd": 0.278568101474
        }
    ]
}