{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 64528196, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 62460018, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.79, 
            "paired": 64528196, 
            "paired_qc_failed": 0, 
            "read1": 32264098, 
            "read1_qc_failed": 0, 
            "read2": 32264098, 
            "read2_qc_failed": 0, 
            "paired_properly": 61796226, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.77, 
            "with_itself": 62221246, 
            "with_itself_qc_failed": 0, 
            "singletons": 238772, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.37, 
            "diff_chroms": 266982, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 134911976, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 131561748, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.52, 
            "paired": 134911976, 
            "paired_qc_failed": 0, 
            "read1": 67455988, 
            "read1_qc_failed": 0, 
            "read2": 67455988, 
            "read2_qc_failed": 0, 
            "paired_properly": 129326575, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.86, 
            "with_itself": 130892790, 
            "with_itself_qc_failed": 0, 
            "singletons": 668958, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.5, 
            "diff_chroms": 887686, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 28036603, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 345260, 
            "paired_opt_dupes": 1054, 
            "dupes_pct": 0.012315
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 56597685, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 240684, 
            "paired_opt_dupes": 1949, 
            "dupes_pct": 0.004253
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 28030836, 
            "distinct_read_pairs": 27685653, 
            "one_read_pair": 27344626, 
            "two_read_pair": 336925, 
            "NRF": 0.987686, 
            "PBC1": 0.987682, 
            "PBC2": 81.159386
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 56554078, 
            "distinct_read_pairs": 56313956, 
            "one_read_pair": 56074958, 
            "two_read_pair": 237897, 
            "NRF": 0.995754, 
            "PBC1": 0.995756, 
            "PBC2": 235.711077
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 55382686, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 55382686, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 55382686, 
            "paired_qc_failed": 0, 
            "read1": 27691343, 
            "read1_qc_failed": 0, 
            "read2": 27691343, 
            "read2_qc_failed": 0, 
            "paired_properly": 55382686, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 55382686, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 112714002, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 112714002, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 112714002, 
            "paired_qc_failed": 0, 
            "read1": 56357001, 
            "read1_qc_failed": 0, 
            "read2": 56357001, 
            "read2_qc_failed": 0, 
            "paired_properly": 112714002, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 112714002, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 35821, 
        "Np": 0, 
        "N_opt": 35821, 
        "N_consv": 35821, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 200, 
            "corr_est_frag_len": 0.297772389469317, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2813339, 
            "argmin_corr": 1500, 
            "min_corr": 0.1804542, 
            "NSC": 1.650127, 
            "RSC": 1.162952
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.413967263116
        }, 
        "rep1-pr1": {
            "FRiP": 0.411562934363
        }, 
        "rep1-pr2": {
            "FRiP": 0.411444996853
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.402127123388
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.174999234156, 
            "auc": 0.494534053288, 
            "ch_div": 0.138665029959, 
            "elbow_pt": 2.48348591887e-287, 
            "jsd": 0.792457281319, 
            "syn_auc": 0.503569605654, 
            "syn_elbow_pt": 0.393344823857, 
            "syn_jsd": 0.487604866136
        }
    ]
}