/CEMT/A54772_3_lane_gembs

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SAMPLE A54772_3_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1549233180 100.00 % 774616590 100.00 % 774616590 100.00 %
General Reads 1472909781 95.07 % 738052105 95.28 % 734857676 94.87 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 57876669 3.74 % 28995758 3.74 % 28880911 3.73 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 18446730 1.19 % 7568727 0.98 % 10878003 1.40 %
Bisulfite_reads C2T 773966274 49.96 % 387752543 50.06 % 386213731 49.86 %
Bisulfite_reads G2A 756820176 48.85 % 379295320 48.97 % 377524856 48.74 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 576290116
Average Unique 74.40 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 77387224745 39.64 % 35511095900 36.38 % 41876128845 42.91 %
Base Counts Overall C 19603173427 10.04 % 880990959 0.90 % 18722182468 19.18 %
Base Counts Overall G 20414967540 10.46 % 19180984487 19.65 % 1233983053 1.26 %
Base Counts Overall T 76177320690 39.02 % 41237078337 42.25 % 34940242353 35.80 %
Base Counts Overall N 1620694278 0.83 % 791540657 0.81 % 829153621 0.85 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9918658551259019
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 647858183



Mapping Quality

Mapping Quality Histogram
A54772_3_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A54772_3_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
C7P5HANXX_7_2
C7P5HANXX_8_2
C7NETANXX_3_2