{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 117587962, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 110158012, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.68, 
            "paired": 117587962, 
            "paired_qc_failed": 0, 
            "read1": 58793981, 
            "read1_qc_failed": 0, 
            "read2": 58793981, 
            "read2_qc_failed": 0, 
            "paired_properly": 105842485, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 90.01, 
            "with_itself": 108474617, 
            "with_itself_qc_failed": 0, 
            "singletons": 1683395, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.43, 
            "diff_chroms": 2097856, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 113987742, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 105961159, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 92.96, 
            "paired": 113987742, 
            "paired_qc_failed": 0, 
            "read1": 56993871, 
            "read1_qc_failed": 0, 
            "read2": 56993871, 
            "read2_qc_failed": 0, 
            "paired_properly": 90037210, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 78.99, 
            "with_itself": 102013829, 
            "with_itself_qc_failed": 0, 
            "singletons": 3947330, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 3.46, 
            "diff_chroms": 8799460, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 46749600, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 537462, 
            "paired_opt_dupes": 1160, 
            "dupes_pct": 0.011497
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 33432972, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 558302, 
            "paired_opt_dupes": 789, 
            "dupes_pct": 0.016699
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 46749340, 
            "distinct_read_pairs": 46211881, 
            "one_read_pair": 45681135, 
            "two_read_pair": 524131, 
            "NRF": 0.988503, 
            "PBC1": 0.988515, 
            "PBC2": 87.15595
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 33432710, 
            "distinct_read_pairs": 32874411, 
            "one_read_pair": 32324786, 
            "two_read_pair": 541092, 
            "NRF": 0.983301, 
            "PBC1": 0.983281, 
            "PBC2": 59.739907
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 92424276, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 92424276, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 92424276, 
            "paired_qc_failed": 0, 
            "read1": 46212138, 
            "read1_qc_failed": 0, 
            "read2": 46212138, 
            "read2_qc_failed": 0, 
            "paired_properly": 92424276, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 92424276, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 65749340, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 65749340, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 65749340, 
            "paired_qc_failed": 0, 
            "read1": 32874670, 
            "read1_qc_failed": 0, 
            "read2": 32874670, 
            "read2_qc_failed": 0, 
            "paired_properly": 65749340, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 65749340, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 203701, 
        "Np": 0, 
        "N_opt": 203701, 
        "N_consv": 203701, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 180, 
            "corr_est_frag_len": 0.251022186608366, 
            "phantom_peak": 55, 
            "corr_phantom_peak": 0.2317994, 
            "argmin_corr": 1500, 
            "min_corr": 0.2037182, 
            "NSC": 1.232203, 
            "RSC": 1.684545
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.489312467069
        }, 
        "rep1-pr1": {
            "FRiP": 0.483241799155
        }, 
        "rep1-pr2": {
            "FRiP": 0.483101791141
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.449055189941
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0763189163354, 
            "auc": 0.495775046434, 
            "ch_div": 0.497575858146, 
            "elbow_pt": 0.0, 
            "jsd": 0.795382434618, 
            "syn_auc": 0.49881887665, 
            "syn_elbow_pt": 0.121642661815, 
            "syn_jsd": 0.541641175039
        }
    ]
}