{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 171900840, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 160444497, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.34, 
            "paired": 171900840, 
            "paired_qc_failed": 0, 
            "read1": 85950420, 
            "read1_qc_failed": 0, 
            "read2": 85950420, 
            "read2_qc_failed": 0, 
            "paired_properly": 157861320, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 91.83, 
            "with_itself": 159232650, 
            "with_itself_qc_failed": 0, 
            "singletons": 1211847, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.7, 
            "diff_chroms": 593130, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 137038710, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 132965142, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.03, 
            "paired": 137038710, 
            "paired_qc_failed": 0, 
            "read1": 68519355, 
            "read1_qc_failed": 0, 
            "read2": 68519355, 
            "read2_qc_failed": 0, 
            "paired_properly": 130403765, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.16, 
            "with_itself": 132147488, 
            "with_itself_qc_failed": 0, 
            "singletons": 817654, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.6, 
            "diff_chroms": 1017994, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 67507464, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 465411, 
            "paired_opt_dupes": 1021, 
            "dupes_pct": 0.006894
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 56489373, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 246609, 
            "paired_opt_dupes": 1947, 
            "dupes_pct": 0.004366
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 67499390, 
            "distinct_read_pairs": 67034039, 
            "one_read_pair": 66572606, 
            "two_read_pair": 457585, 
            "NRF": 0.993106, 
            "PBC1": 0.993116, 
            "PBC2": 145.486863
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 56440954, 
            "distinct_read_pairs": 56195118, 
            "one_read_pair": 55950441, 
            "two_read_pair": 243541, 
            "NRF": 0.995644, 
            "PBC1": 0.995646, 
            "PBC2": 229.737256
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 134084106, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 134084106, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 134084106, 
            "paired_qc_failed": 0, 
            "read1": 67042053, 
            "read1_qc_failed": 0, 
            "read2": 67042053, 
            "read2_qc_failed": 0, 
            "paired_properly": 134084106, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 134084106, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 112485528, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 112485528, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 112485528, 
            "paired_qc_failed": 0, 
            "read1": 56242764, 
            "read1_qc_failed": 0, 
            "read2": 56242764, 
            "read2_qc_failed": 0, 
            "paired_properly": 112485528, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 112485528, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 70960, 
        "Np": 0, 
        "N_opt": 70960, 
        "N_consv": 70960, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 105, 
            "corr_est_frag_len": 0.185131309509356, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2092658, 
            "argmin_corr": 1500, 
            "min_corr": 0.1772375, 
            "NSC": 1.044538, 
            "RSC": 0.2464644
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.085202467063
        }, 
        "rep1-pr1": {
            "FRiP": 0.0981625454769
        }, 
        "rep1-pr2": {
            "FRiP": 0.0983225566689
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.039893277205
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.301445902149, 
            "auc": 0.496486003295, 
            "ch_div": 0.0936709670583, 
            "elbow_pt": 0.0, 
            "jsd": 0.567387796964, 
            "syn_auc": 0.505845272948, 
            "syn_elbow_pt": 0.0310618326381, 
            "syn_jsd": 0.250208599324
        }
    ]
}
