/cemt/A54771_3_lane_gembs

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SAMPLE A54771_3_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1431672652 100.00 % 715836326 100.00 % 715836326 100.00 %
General Reads 1367687215 95.53 % 685202988 95.72 % 682484227 95.34 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 45899507 3.21 % 23000748 3.21 % 22898759 3.20 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 18085930 1.26 % 7632590 1.07 % 10453340 1.46 %
Bisulfite_reads C2T 715438457 49.97 % 358379613 50.06 % 357058844 49.88 %
Bisulfite_reads G2A 698148265 48.76 % 349824123 48.87 % 348324142 48.66 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 522864514
Average Unique 73.04 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 71429569802 39.60 % 32688063742 36.24 % 38741506060 42.95 %
Base Counts Overall C 18229937339 10.11 % 905750621 1.00 % 17324186718 19.21 %
Base Counts Overall G 19173038797 10.63 % 17852702848 19.79 % 1320335949 1.46 %
Base Counts Overall T 70048402325 38.83 % 38013211229 42.15 % 32035191096 35.52 %
Base Counts Overall N 1509805889 0.84 % 735648636 0.82 % 774157253 0.86 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9900727928001458
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 590224931



Mapping Quality

Mapping Quality Histogram
A54771_3_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A54771_3_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
C7P5HANXX_6_1
C7P5HANXX_5_1
C7NETANXX_2_1