{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 88571282, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 84333999, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.22, 
            "paired": 88571282, 
            "paired_qc_failed": 0, 
            "read1": 44285641, 
            "read1_qc_failed": 0, 
            "read2": 44285641, 
            "read2_qc_failed": 0, 
            "paired_properly": 82885369, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 93.58, 
            "with_itself": 83864850, 
            "with_itself_qc_failed": 0, 
            "singletons": 469149, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.53, 
            "diff_chroms": 589027, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 188531594, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 183497192, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.33, 
            "paired": 188531594, 
            "paired_qc_failed": 0, 
            "read1": 94265797, 
            "read1_qc_failed": 0, 
            "read2": 94265797, 
            "read2_qc_failed": 0, 
            "paired_properly": 180692140, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.84, 
            "with_itself": 182539954, 
            "with_itself_qc_failed": 0, 
            "singletons": 957238, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.51, 
            "diff_chroms": 942066, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 36546899, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 183303, 
            "paired_opt_dupes": 1772, 
            "dupes_pct": 0.005016
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 78941456, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 448927, 
            "paired_opt_dupes": 2929, 
            "dupes_pct": 0.005687
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 36542821, 
            "distinct_read_pairs": 36359538, 
            "one_read_pair": 36177188, 
            "two_read_pair": 181426, 
            "NRF": 0.994984, 
            "PBC1": 0.994985, 
            "PBC2": 199.40465
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 78883545, 
            "distinct_read_pairs": 78435677, 
            "one_read_pair": 77991934, 
            "two_read_pair": 439949, 
            "NRF": 0.994322, 
            "PBC1": 0.994343, 
            "PBC2": 177.274943
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 72727192, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 72727192, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 72727192, 
            "paired_qc_failed": 0, 
            "read1": 36363596, 
            "read1_qc_failed": 0, 
            "read2": 36363596, 
            "read2_qc_failed": 0, 
            "paired_properly": 72727192, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 72727192, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 156985058, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 156985058, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 156985058, 
            "paired_qc_failed": 0, 
            "read1": 78492529, 
            "read1_qc_failed": 0, 
            "read2": 78492529, 
            "read2_qc_failed": 0, 
            "paired_properly": 156985058, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 156985058, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 175662, 
        "Np": 0, 
        "N_opt": 175662, 
        "N_consv": 175662, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 135, 
            "corr_est_frag_len": 0.189240037381407, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2029363, 
            "argmin_corr": 1500, 
            "min_corr": 0.1813287, 
            "NSC": 1.04363, 
            "RSC": 0.3661371
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.357034500823
        }, 
        "rep1-pr1": {
            "FRiP": 0.325827682409
        }, 
        "rep1-pr2": {
            "FRiP": 0.325611673064
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.291532059621
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.220885267228, 
            "auc": 0.495227613805, 
            "ch_div": 0.117454548362, 
            "elbow_pt": 0.0, 
            "jsd": 0.699495403857, 
            "syn_auc": 0.504420529435, 
            "syn_elbow_pt": 0.21273081866, 
            "syn_jsd": 0.374178862425
        }
    ]
}
