/cemt/A54777_3_lane_gembs/C7P30ANXX_6_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 479886172 | 100.00 % | 239943086 | 100.00 % | 239943086 | 100.00 % |
| General Reads | 454474789 | 94.70 % | 227623369 | 94.87 % | 226851420 | 94.54 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 16803419 | 3.50 % | 8412939 | 3.51 % | 8390480 | 3.50 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 8607964 | 1.79 % | 3906778 | 1.63 % | 4701186 | 1.96 % |
| Bisulfite_reads C2T | 239224929 | 49.85 % | 119798374 | 49.93 % | 119426555 | 49.77 % |
| Bisulfite_reads G2A | 232053279 | 48.36 % | 116237934 | 48.44 % | 115815345 | 48.27 % |
| Concept | Value |
|---|---|
| Unique Fragments | 176835636 |
| Average Unique | 73.70 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 23940553307 | 39.59 % | 11038329698 | 36.51 % | 12902223609 | 42.68 % |
| Base Counts Overall C | 6142675382 | 10.16 % | 254991322 | 0.84 % | 5887684060 | 19.47 % |
| Base Counts Overall G | 6357857931 | 10.51 % | 5998781885 | 19.84 % | 359076046 | 1.19 % |
| Base Counts Overall T | 23538802774 | 38.93 % | 12697706827 | 42.00 % | 10841095947 | 35.86 % |
| Base Counts Overall N | 485768278 | 0.80 % | 243019104 | 0.80 % | 242749174 | 0.80 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9916430830077905 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 200565193 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 239943086 |
| 125 | 239943086 |
| Insert Size Histogram |
|---|
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