{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 79827642, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 77663730, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.29, 
            "paired": 79827642, 
            "paired_qc_failed": 0, 
            "read1": 39913821, 
            "read1_qc_failed": 0, 
            "read2": 39913821, 
            "read2_qc_failed": 0, 
            "paired_properly": 76925656, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.36, 
            "with_itself": 77415532, 
            "with_itself_qc_failed": 0, 
            "singletons": 248198, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.31, 
            "diff_chroms": 299018, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 91058302, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 88858777, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.58, 
            "paired": 91058302, 
            "paired_qc_failed": 0, 
            "read1": 45529151, 
            "read1_qc_failed": 0, 
            "read2": 45529151, 
            "read2_qc_failed": 0, 
            "paired_properly": 87463672, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.05, 
            "with_itself": 88414762, 
            "with_itself_qc_failed": 0, 
            "singletons": 444015, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.49, 
            "diff_chroms": 473257, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 35613210, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 218620, 
            "paired_opt_dupes": 1238, 
            "dupes_pct": 0.006139
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 38226012, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 140477, 
            "paired_opt_dupes": 1407, 
            "dupes_pct": 0.003675
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 35608886, 
            "distinct_read_pairs": 35390292, 
            "one_read_pair": 35173042, 
            "two_read_pair": 215911, 
            "NRF": 0.993861, 
            "PBC1": 0.993861, 
            "PBC2": 162.90528
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 38152882, 
            "distinct_read_pairs": 38013834, 
            "one_read_pair": 37875216, 
            "two_read_pair": 138191, 
            "NRF": 0.996356, 
            "PBC1": 0.996353, 
            "PBC2": 274.078746
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 70789180, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 70789180, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 70789180, 
            "paired_qc_failed": 0, 
            "read1": 35394590, 
            "read1_qc_failed": 0, 
            "read2": 35394590, 
            "read2_qc_failed": 0, 
            "paired_properly": 70789180, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 70789180, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 76171070, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 76171070, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 76171070, 
            "paired_qc_failed": 0, 
            "read1": 38085535, 
            "read1_qc_failed": 0, 
            "read2": 38085535, 
            "read2_qc_failed": 0, 
            "paired_properly": 76171070, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 76171070, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 125784, 
        "Np": 0, 
        "N_opt": 125784, 
        "N_consv": 125784, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 190, 
            "corr_est_frag_len": 0.214658516513159, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2116668, 
            "argmin_corr": 1500, 
            "min_corr": 0.1931669, 
            "NSC": 1.111259, 
            "RSC": 1.161714
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.483393849929
        }, 
        "rep1-pr1": {
            "FRiP": 0.458307549426
        }, 
        "rep1-pr2": {
            "FRiP": 0.458262452313
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.433716229298
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.154287208439, 
            "auc": 0.495167932797, 
            "ch_div": 0.175034287519, 
            "elbow_pt": 0.0, 
            "jsd": 0.759931384976, 
            "syn_auc": 0.497409330506, 
            "syn_elbow_pt": 0.304780813665, 
            "syn_jsd": 0.479698930928
        }
    ]
}