/cemt/A54778_3_lane_gembs/C7JMAANXX_6_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 452291402 | 100.00 % | 226145701 | 100.00 % | 226145701 | 100.00 % |
| General Reads | 432480419 | 95.62 % | 216553169 | 95.76 % | 215927250 | 95.48 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 15024627 | 3.32 % | 7515933 | 3.32 % | 7508694 | 3.32 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4786356 | 1.06 % | 2076599 | 0.92 % | 2709757 | 1.20 % |
| Bisulfite_reads C2T | 226171926 | 50.01 % | 113223881 | 50.07 % | 112948045 | 49.94 % |
| Bisulfite_reads G2A | 221333120 | 48.94 % | 110845221 | 49.01 % | 110487899 | 48.86 % |
| Concept | Value |
|---|---|
| Unique Fragments | 174347223 |
| Average Unique | 77.10 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 22524916229 | 39.53 % | 10472157861 | 36.75 % | 12052758368 | 42.30 % |
| Base Counts Overall C | 5745411886 | 10.08 % | 235969718 | 0.83 % | 5509442168 | 19.34 % |
| Base Counts Overall G | 5885506567 | 10.33 % | 5585117240 | 19.60 % | 300389327 | 1.05 % |
| Base Counts Overall T | 22373339137 | 39.26 % | 11969364347 | 42.01 % | 10403974790 | 36.51 % |
| Base Counts Overall N | 459542833 | 0.81 % | 231749160 | 0.81 % | 227793673 | 0.80 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9931862381031116 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 196021130 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 226145701 |
| 125 | 226145701 |
| Insert Size Histogram |
|---|
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