/cemt/A54778_3_lane_gembs/C7P30ANXX_7_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 492845706 | 100.00 % | 246422853 | 100.00 % | 246422853 | 100.00 % |
| General Reads | 471415299 | 95.65 % | 236074245 | 95.80 % | 235341054 | 95.50 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 16330254 | 3.31 % | 8176609 | 3.32 % | 8153645 | 3.31 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5100153 | 1.03 % | 2171999 | 0.88 % | 2928154 | 1.19 % |
| Bisulfite_reads C2T | 246451878 | 50.01 % | 123397892 | 50.08 % | 123053986 | 49.94 % |
| Bisulfite_reads G2A | 241293675 | 48.96 % | 120852962 | 49.04 % | 120440713 | 48.88 % |
| Concept | Value |
|---|---|
| Unique Fragments | 190252868 |
| Average Unique | 77.21 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 24643861956 | 39.69 % | 11470540058 | 36.94 % | 13173321898 | 42.43 % |
| Base Counts Overall C | 6254438092 | 10.07 % | 259414162 | 0.84 % | 5995023930 | 19.31 % |
| Base Counts Overall G | 6437056009 | 10.37 % | 6098660354 | 19.64 % | 338395655 | 1.09 % |
| Base Counts Overall T | 24263358610 | 39.07 % | 12970851719 | 41.78 % | 11292506891 | 36.37 % |
| Base Counts Overall N | 499844289 | 0.80 % | 249813185 | 0.80 % | 250031104 | 0.81 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9928175631211524 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 213678049 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 246422853 |
| 125 | 246422853 |
| Insert Size Histogram |
|---|
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