/CEMT/A50431_A50429_4_lane_gembs

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SAMPLE A50431_A50429_4_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 482224944 100.00 % 241112472 100.00 % 241112472 100.00 %
General Reads 461117460 95.62 % 231151229 95.87 % 229966231 95.38 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 2234127 0.46 % 1118823 0.46 % 1115304 0.46 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 18873357 3.91 % 8842420 3.67 % 10030937 4.16 %
Bisulfite_reads C2T 236830350 49.11 % 118720485 49.24 % 118109865 48.99 %
Bisulfite_reads G2A 226521237 46.97 % 113549567 47.09 % 112971670 46.85 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 169809423
Average Unique 70.43 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 23821457767 39.21 % 10241671047 33.71 % 13579786720 44.70 %
Base Counts Overall C 6267743559 10.32 % 393393819 1.29 % 5874349740 19.34 %
Base Counts Overall G 6517805839 10.73 % 6016505928 19.80 % 501299911 1.65 %
Base Counts Overall T 23631769758 38.89 % 13478999851 44.37 % 10152769907 33.42 %
Base Counts Overall N 521566021 0.86 % 249600827 0.82 % 271965194 0.90 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9923611282144129
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 195336903



Mapping Quality

Mapping Quality Histogram
A50431_A50429_4_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A50431_A50429_4_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
C6AH3ANXX_5_2
C6JC4ANXX_3_2