/CEMT/methylation/A50431_A50429_4_lane_gembs
BACK
SAMPLE A50431_A50429_4_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
26027782 |
7019462 |
26.97 % |
| NonRefCpG |
399064 |
64591 |
16.19 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
5872233 |
12.58 % |
809681 |
4.79 % |
201442 |
28.18 % |
19599 |
10.21 % |
| Intermediate (0.3-0.7) |
14233022 |
30.49 % |
3685392 |
21.80 % |
220387 |
30.83 % |
46290 |
24.11 % |
| Methylated (0.7-1) |
26569721 |
56.92 % |
12410741 |
73.41 % |
292913 |
40.98 % |
126099 |
65.68 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.750 |
|
0.840 |
|
0.600 |
|
0.810 |
|