/CEMT/A50428_A50426_4_lane_gembs

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SAMPLE A50428_A50426_4_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 367103222 100.00 % 183551611 100.00 % 183551611 100.00 %
General Reads 357603024 97.41 % 179257634 97.66 % 178345390 97.16 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 2637151 0.72 % 1320678 0.72 % 1316473 0.72 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 6863047 1.87 % 2973299 1.62 % 3889748 2.12 %
Bisulfite_reads C2T 183858807 50.08 % 92154621 50.21 % 91704186 49.96 %
Bisulfite_reads G2A 176381368 48.05 % 88423691 48.17 % 87957677 47.92 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 153576055
Average Unique 83.67 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 18146726932 39.23 % 7093968887 30.67 % 11052758045 47.79 %
Base Counts Overall C 4738920506 10.25 % 212391249 0.92 % 4526529257 19.57 %
Base Counts Overall G 4721921590 10.21 % 4524576411 19.56 % 197345179 0.85 %
Base Counts Overall T 18254364258 39.46 % 11106188835 48.02 % 7148175423 30.91 %
Base Counts Overall N 393072686 0.85 % 190377604 0.82 % 202695082 0.88 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9955304640283552
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 174100468



Mapping Quality

Mapping Quality Histogram
A50428_A50426_4_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A50428_A50426_4_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
C6JC4ANXX_2_2
C6AH3ANXX_4_2