/CEMT/methylation/A50428_A50426_4_lane_gembs
BACK
SAMPLE A50428_A50426_4_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
26184460 |
9804272 |
37.44 % |
| NonRefCpG |
326653 |
83500 |
25.56 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
6228802 |
12.55 % |
1151562 |
4.83 % |
129532 |
21.45 % |
14600 |
6.44 % |
| Intermediate (0.3-0.7) |
14678833 |
29.57 % |
5349184 |
22.43 % |
183223 |
30.34 % |
52554 |
23.19 % |
| Methylated (0.7-1) |
28731074 |
57.88 % |
17346734 |
72.74 % |
291072 |
48.20 % |
159430 |
70.36 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.750 |
|
0.830 |
|
0.680 |
|
0.820 |
|