{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 63671314, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 61471331, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.54, 
            "paired": 63671314, 
            "paired_qc_failed": 0, 
            "read1": 31835657, 
            "read1_qc_failed": 0, 
            "read2": 31835657, 
            "read2_qc_failed": 0, 
            "paired_properly": 60782964, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.46, 
            "with_itself": 61258170, 
            "with_itself_qc_failed": 0, 
            "singletons": 213161, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.33, 
            "diff_chroms": 308768, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 153209202, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 149479079, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.57, 
            "paired": 153209202, 
            "paired_qc_failed": 0, 
            "read1": 76604601, 
            "read1_qc_failed": 0, 
            "read2": 76604601, 
            "read2_qc_failed": 0, 
            "paired_properly": 147025154, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.96, 
            "with_itself": 148752334, 
            "with_itself_qc_failed": 0, 
            "singletons": 726745, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.47, 
            "diff_chroms": 985904, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 27958035, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 99701, 
            "paired_opt_dupes": 708, 
            "dupes_pct": 0.003566
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 64022479, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 238123, 
            "paired_opt_dupes": 1074, 
            "dupes_pct": 0.003719
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 27954603, 
            "distinct_read_pairs": 27854923, 
            "one_read_pair": 27755538, 
            "two_read_pair": 99091, 
            "NRF": 0.996434, 
            "PBC1": 0.996432, 
            "PBC2": 280.101503
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 63951647, 
            "distinct_read_pairs": 63714783, 
            "one_read_pair": 63480345, 
            "two_read_pair": 232360, 
            "NRF": 0.996296, 
            "PBC1": 0.996321, 
            "PBC2": 273.198248
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 55716668, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 55716668, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 55716668, 
            "paired_qc_failed": 0, 
            "read1": 27858334, 
            "read1_qc_failed": 0, 
            "read2": 27858334, 
            "read2_qc_failed": 0, 
            "paired_properly": 55716668, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 55716668, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 127568712, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 127568712, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 127568712, 
            "paired_qc_failed": 0, 
            "read1": 63784356, 
            "read1_qc_failed": 0, 
            "read2": 63784356, 
            "read2_qc_failed": 0, 
            "paired_properly": 127568712, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 127568712, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 133114, 
        "Np": 0, 
        "N_opt": 133114, 
        "N_consv": 133114, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 165, 
            "corr_est_frag_len": 0.191526276286496, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1930984, 
            "argmin_corr": 1500, 
            "min_corr": 0.1796264, 
            "NSC": 1.066248, 
            "RSC": 0.8833038
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.353991159839
        }, 
        "rep1-pr1": {
            "FRiP": 0.33702418287
        }, 
        "rep1-pr2": {
            "FRiP": 0.336737758591
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.28196699736
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.201959097552, 
            "auc": 0.494554188648, 
            "ch_div": 0.151962205379, 
            "elbow_pt": 1.73952288088e-289, 
            "jsd": 0.688918122984, 
            "syn_auc": 0.504039149787, 
            "syn_elbow_pt": 0.249478230048, 
            "syn_jsd": 0.393754021889
        }
    ]
}
