/CEMT/A54766_3_lane_gembs/C7NH9ANXX_7_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 432293244 | 100.00 % | 216146622 | 100.00 % | 216146622 | 100.00 % |
| General Reads | 407550897 | 94.28 % | 203280356 | 94.05 % | 204270541 | 94.51 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 15809628 | 3.66 % | 7880480 | 3.65 % | 7929148 | 3.67 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 8932719 | 2.07 % | 4985786 | 2.31 % | 3946933 | 1.83 % |
| Bisulfite_reads C2T | 215931764 | 49.95 % | 107696301 | 49.83 % | 108235463 | 50.08 % |
| Bisulfite_reads G2A | 207428761 | 47.98 % | 103464535 | 47.87 % | 103964226 | 48.10 % |
| Concept | Value |
|---|---|
| Unique Fragments | 148116940 |
| Average Unique | 68.53 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 21265351168 | 39.04 % | 10247984710 | 37.63 % | 11017366458 | 40.45 % |
| Base Counts Overall C | 5736545173 | 10.53 % | 331271400 | 1.22 % | 5405273773 | 19.85 % |
| Base Counts Overall G | 5762686754 | 10.58 % | 5393933211 | 19.81 % | 368753543 | 1.35 % |
| Base Counts Overall T | 21061671656 | 38.67 % | 10834886228 | 39.78 % | 10226785428 | 37.55 % |
| Base Counts Overall N | 642693993 | 1.18 % | 426398823 | 1.57 % | 216295170 | 0.79 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9841874380260933 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 171719742 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 216146622 |
| 125 | 216146622 |
| Insert Size Histogram |
|---|
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