{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 150572430, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 142106101, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.38, 
            "paired": 150572430, 
            "paired_qc_failed": 0, 
            "read1": 75286215, 
            "read1_qc_failed": 0, 
            "read2": 75286215, 
            "read2_qc_failed": 0, 
            "paired_properly": 140573666, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 93.36, 
            "with_itself": 141411134, 
            "with_itself_qc_failed": 0, 
            "singletons": 694967, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.46, 
            "diff_chroms": 379308, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 197624996, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 192713678, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.51, 
            "paired": 197624996, 
            "paired_qc_failed": 0, 
            "read1": 98812498, 
            "read1_qc_failed": 0, 
            "read2": 98812498, 
            "read2_qc_failed": 0, 
            "paired_properly": 189183779, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.73, 
            "with_itself": 191730743, 
            "with_itself_qc_failed": 0, 
            "singletons": 982935, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.5, 
            "diff_chroms": 1513270, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 61759304, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 604530, 
            "paired_opt_dupes": 858, 
            "dupes_pct": 0.009788
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 82282989, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 411217, 
            "paired_opt_dupes": 3070, 
            "dupes_pct": 0.004998
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 61755644, 
            "distinct_read_pairs": 61151151, 
            "one_read_pair": 60552721, 
            "two_read_pair": 592443, 
            "NRF": 0.990212, 
            "PBC1": 0.990214, 
            "PBC2": 102.208518
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 82255330, 
            "distinct_read_pairs": 81844454, 
            "one_read_pair": 81439605, 
            "two_read_pair": 399981, 
            "NRF": 0.995005, 
            "PBC1": 0.995053, 
            "PBC2": 203.608684
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 122309548, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 122309548, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 122309548, 
            "paired_qc_failed": 0, 
            "read1": 61154774, 
            "read1_qc_failed": 0, 
            "read2": 61154774, 
            "read2_qc_failed": 0, 
            "paired_properly": 122309548, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 122309548, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 163743544, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 163743544, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 163743544, 
            "paired_qc_failed": 0, 
            "read1": 81871772, 
            "read1_qc_failed": 0, 
            "read2": 81871772, 
            "read2_qc_failed": 0, 
            "paired_properly": 163743544, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 163743544, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 222837, 
        "Np": 0, 
        "N_opt": 222837, 
        "N_consv": 222837, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 125, 
            "corr_est_frag_len": 0.184800107014852, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1941987, 
            "argmin_corr": 1500, 
            "min_corr": 0.1779107, 
            "NSC": 1.038724, 
            "RSC": 0.4229731
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.297361990782
        }, 
        "rep1-pr1": {
            "FRiP": 0.278390094761
        }, 
        "rep1-pr2": {
            "FRiP": 0.278958057207
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.212339838051
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.240987343994, 
            "auc": 0.496318430322, 
            "ch_div": 0.109058993818, 
            "elbow_pt": 0.0, 
            "jsd": 0.629447327805, 
            "syn_auc": 0.500973324113, 
            "syn_elbow_pt": 0.181375822227, 
            "syn_jsd": 0.345157962865
        }
    ]
}