{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 107285140, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 98574148, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 91.88, 
            "paired": 107285140, 
            "paired_qc_failed": 0, 
            "read1": 53642570, 
            "read1_qc_failed": 0, 
            "read2": 53642570, 
            "read2_qc_failed": 0, 
            "paired_properly": 96876256, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 90.3, 
            "with_itself": 97762257, 
            "with_itself_qc_failed": 0, 
            "singletons": 811891, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.76, 
            "diff_chroms": 408575, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 152308104, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 148017607, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.18, 
            "paired": 152308104, 
            "paired_qc_failed": 0, 
            "read1": 76154052, 
            "read1_qc_failed": 0, 
            "read2": 76154052, 
            "read2_qc_failed": 0, 
            "paired_properly": 145664311, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.64, 
            "with_itself": 147236867, 
            "with_itself_qc_failed": 0, 
            "singletons": 780740, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.51, 
            "diff_chroms": 863963, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 41443041, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 213240, 
            "paired_opt_dupes": 1784, 
            "dupes_pct": 0.005145
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 63227368, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 220283, 
            "paired_opt_dupes": 1066, 
            "dupes_pct": 0.003484
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 41434636, 
            "distinct_read_pairs": 41221442, 
            "one_read_pair": 41009325, 
            "two_read_pair": 211050, 
            "NRF": 0.994855, 
            "PBC1": 0.994854, 
            "PBC2": 194.310945
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 63148791, 
            "distinct_read_pairs": 62930074, 
            "one_read_pair": 62712523, 
            "two_read_pair": 216455, 
            "NRF": 0.996536, 
            "PBC1": 0.996543, 
            "PBC2": 289.725453
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 82459602, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 82459602, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 82459602, 
            "paired_qc_failed": 0, 
            "read1": 41229801, 
            "read1_qc_failed": 0, 
            "read2": 41229801, 
            "read2_qc_failed": 0, 
            "paired_properly": 82459602, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 82459602, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 126014170, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 126014170, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 126014170, 
            "paired_qc_failed": 0, 
            "read1": 63007085, 
            "read1_qc_failed": 0, 
            "read2": 63007085, 
            "read2_qc_failed": 0, 
            "paired_properly": 126014170, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 126014170, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 104133, 
        "Np": 0, 
        "N_opt": 104133, 
        "N_consv": 104133, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 120, 
            "corr_est_frag_len": 0.188592010966972, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2094816, 
            "argmin_corr": 1500, 
            "min_corr": 0.1801597, 
            "NSC": 1.046804, 
            "RSC": 0.2875763
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.189007143418
        }, 
        "rep1-pr1": {
            "FRiP": 0.162960820245
        }, 
        "rep1-pr2": {
            "FRiP": 0.162889862029
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0916495594696
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.273204127144, 
            "auc": 0.495520705061, 
            "ch_div": 0.101365508417, 
            "elbow_pt": 0.0, 
            "jsd": 0.601907313367, 
            "syn_auc": 0.501860687836, 
            "syn_elbow_pt": 0.116451679409, 
            "syn_jsd": 0.290793719539
        }
    ]
}