/CEMT/A54765_3_lane_gembs

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SAMPLE A54765_3_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1373461400 100.00 % 686730700 100.00 % 686730700 100.00 %
General Reads 1297148783 94.44 % 649452293 94.57 % 647696490 94.32 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 51155785 3.72 % 25581883 3.73 % 25573902 3.72 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 25156832 1.83 % 11696524 1.70 % 13460308 1.96 %
Bisulfite_reads C2T 689748845 50.22 % 345275393 50.28 % 344473452 50.16 %
Bisulfite_reads G2A 658555723 47.95 % 329758783 48.02 % 328796940 47.88 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 490637741
Average Unique 71.45 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 67798536974 39.18 % 31792498487 36.74 % 36006038487 41.61 %
Base Counts Overall C 18177242037 10.50 % 842752119 0.97 % 17334489918 20.03 %
Base Counts Overall G 18516814757 10.70 % 17497732327 20.22 % 1019082430 1.18 %
Base Counts Overall T 66991124574 38.71 % 35602888456 41.15 % 31388236118 36.28 %
Base Counts Overall N 1572418058 0.91 % 792196811 0.92 % 780221247 0.90 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9920717904075206
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 568408820



Mapping Quality

Mapping Quality Histogram
A54765_3_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A54765_3_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
C7NH9ANXX_6_2
C7PJUANXX_3_2
C7PJUANXX_4_2