/CEMT/A54765_3_lane_gembs/C7PJUANXX_3_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 444652548 | 100.00 % | 222326274 | 100.00 % | 222326274 | 100.00 % |
| General Reads | 420777083 | 94.63 % | 210863960 | 94.84 % | 209913123 | 94.42 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 16692862 | 3.75 % | 8354313 | 3.76 % | 8338549 | 3.75 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7182603 | 1.62 % | 3108001 | 1.40 % | 4074602 | 1.83 % |
| Bisulfite_reads C2T | 223861677 | 50.35 % | 112153428 | 50.45 % | 111708249 | 50.25 % |
| Bisulfite_reads G2A | 213608268 | 48.04 % | 107064845 | 48.16 % | 106543423 | 47.92 % |
| Concept | Value |
|---|---|
| Unique Fragments | 159218498 |
| Average Unique | 71.61 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 21956074023 | 39.19 % | 10281633533 | 36.70 % | 11674440490 | 41.67 % |
| Base Counts Overall C | 5875175913 | 10.49 % | 253599446 | 0.91 % | 5621576467 | 20.07 % |
| Base Counts Overall G | 6042320441 | 10.78 % | 5711343972 | 20.39 % | 330976469 | 1.18 % |
| Base Counts Overall T | 21661354804 | 38.66 % | 11542039320 | 41.20 % | 10119315484 | 36.12 % |
| Base Counts Overall N | 491295867 | 0.88 % | 224494253 | 0.80 % | 266801614 | 0.95 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9939660861678182 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 184751444 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 222326274 |
| 125 | 222326274 |
| Insert Size Histogram |
|---|
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