{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 178827422, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 172038123, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.2, 
            "paired": 178827422, 
            "paired_qc_failed": 0, 
            "read1": 89413711, 
            "read1_qc_failed": 0, 
            "read2": 89413711, 
            "read2_qc_failed": 0, 
            "paired_properly": 169397970, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.73, 
            "with_itself": 171104186, 
            "with_itself_qc_failed": 0, 
            "singletons": 933937, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.52, 
            "diff_chroms": 1011970, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 137918120, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 134017183, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.17, 
            "paired": 137918120, 
            "paired_qc_failed": 0, 
            "read1": 68959060, 
            "read1_qc_failed": 0, 
            "read2": 68959060, 
            "read2_qc_failed": 0, 
            "paired_properly": 131780533, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.55, 
            "with_itself": 133321503, 
            "with_itself_qc_failed": 0, 
            "singletons": 695680, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.5, 
            "diff_chroms": 866285, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 74628903, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 419316, 
            "paired_opt_dupes": 2061, 
            "dupes_pct": 0.005619
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 57429716, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 221431, 
            "paired_opt_dupes": 1055, 
            "dupes_pct": 0.003856
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 74621692, 
            "distinct_read_pairs": 74202426, 
            "one_read_pair": 73786096, 
            "two_read_pair": 413452, 
            "NRF": 0.994381, 
            "PBC1": 0.994389, 
            "PBC2": 178.463512
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 57381501, 
            "distinct_read_pairs": 57160737, 
            "one_read_pair": 56941613, 
            "two_read_pair": 217603, 
            "NRF": 0.996153, 
            "PBC1": 0.996167, 
            "PBC2": 261.676599
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 148419174, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 148419174, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 148419174, 
            "paired_qc_failed": 0, 
            "read1": 74209587, 
            "read1_qc_failed": 0, 
            "read2": 74209587, 
            "read2_qc_failed": 0, 
            "paired_properly": 148419174, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 148419174, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 114416570, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 114416570, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 114416570, 
            "paired_qc_failed": 0, 
            "read1": 57208285, 
            "read1_qc_failed": 0, 
            "read2": 57208285, 
            "read2_qc_failed": 0, 
            "paired_properly": 114416570, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 114416570, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 226669, 
        "Np": 0, 
        "N_opt": 226669, 
        "N_consv": 226669, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 145, 
            "corr_est_frag_len": 0.189087782064721, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2038353, 
            "argmin_corr": 1500, 
            "min_corr": 0.180805, 
            "NSC": 1.04581, 
            "RSC": 0.3596458
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.352665929009
        }, 
        "rep1-pr1": {
            "FRiP": 0.353606700137
        }, 
        "rep1-pr2": {
            "FRiP": 0.35379522497
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.323376967486
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.240077891497, 
            "auc": 0.496662412756, 
            "ch_div": 0.0996075593309, 
            "elbow_pt": 0.0, 
            "jsd": 0.717544676861, 
            "syn_auc": 0.502577877384, 
            "syn_elbow_pt": 0.19935650834, 
            "syn_jsd": 0.354155631314
        }
    ]
}
