/cemt/A54769_3_lane_gembs

BACK

SAMPLE A54769_3_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1468775482 100.00 % 734387741 100.00 % 734387741 100.00 %
General Reads 1410305670 96.02 % 706647811 96.22 % 703657859 95.82 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 38245300 2.60 % 19135985 2.61 % 19109315 2.60 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 20224512 1.38 % 8603945 1.17 % 11620567 1.58 %
Bisulfite_reads C2T 737465221 50.21 % 369410850 50.30 % 368054371 50.12 %
Bisulfite_reads G2A 711085749 48.41 % 356372946 48.53 % 354712803 48.30 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 522440664
Average Unique 71.14 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 73130764900 39.52 % 34492753327 37.28 % 38638011573 41.76 %
Base Counts Overall C 19058326926 10.30 % 827024364 0.89 % 18231302562 19.70 %
Base Counts Overall G 19609858653 10.60 % 18513968356 20.01 % 1095890297 1.18 %
Base Counts Overall T 71725573792 38.76 % 37955154069 41.02 % 33770419723 36.50 %
Base Counts Overall N 1541186461 0.83 % 743955250 0.80 % 797231211 0.86 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9939605812145202
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 603013536



Mapping Quality

Mapping Quality Histogram
A54769_3_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A54769_3_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
C7P5HANXX_1_1
C7P5HANXX_2_1
C7NTCANXX_2_1