/cemt/A54769_3_lane_gembs/C7NTCANXX_2_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 510950350 | 100.00 % | 255475175 | 100.00 % | 255475175 | 100.00 % |
| General Reads | 490345269 | 95.97 % | 245652240 | 96.16 % | 244693029 | 95.78 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 13382299 | 2.62 % | 6689542 | 2.62 % | 6692757 | 2.62 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7222782 | 1.41 % | 3133393 | 1.23 % | 4089389 | 1.60 % |
| Bisulfite_reads C2T | 256489387 | 50.20 % | 128449895 | 50.28 % | 128039492 | 50.12 % |
| Bisulfite_reads G2A | 247238181 | 48.39 % | 123891887 | 48.49 % | 123346294 | 48.28 % |
| Concept | Value |
|---|---|
| Unique Fragments | 181915671 |
| Average Unique | 71.21 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 25411893626 | 39.47 % | 11982067774 | 37.22 % | 13429825852 | 41.72 % |
| Base Counts Overall C | 6655767112 | 10.34 % | 287867671 | 0.89 % | 6367899441 | 19.78 % |
| Base Counts Overall G | 6813952859 | 10.58 % | 6437693680 | 20.00 % | 376259179 | 1.17 % |
| Base Counts Overall T | 24960841976 | 38.77 % | 13221782394 | 41.07 % | 11739059582 | 36.47 % |
| Base Counts Overall N | 537288527 | 0.83 % | 260460531 | 0.81 % | 276827996 | 0.86 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9940884242397987 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 209911049 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 255475175 |
| 125 | 255475175 |
| Insert Size Histogram |
|---|
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