/cemt/A54770_3_lane_gembs

BACK

SAMPLE A54770_3_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1426587882 100.00 % 713293941 100.00 % 713293941 100.00 %
General Reads 1368835162 95.95 % 685740656 96.14 % 683094506 95.77 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 38513420 2.70 % 19291068 2.70 % 19222352 2.69 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 19239300 1.35 % 8262217 1.16 % 10977083 1.54 %
Bisulfite_reads C2T 713927462 50.04 % 357600488 50.13 % 356326974 49.96 %
Bisulfite_reads G2A 693421120 48.61 % 347431236 48.71 % 345989884 48.51 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 523347144
Average Unique 73.37 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 71191464861 39.61 % 33422245585 37.19 % 37769219276 42.02 %
Base Counts Overall C 18089851329 10.06 % 916795033 1.02 % 17173056296 19.11 %
Base Counts Overall G 19000488285 10.57 % 17699612923 19.69 % 1300875362 1.45 %
Base Counts Overall T 69947818459 38.91 % 37101022366 41.28 % 32846796093 36.55 %
Base Counts Overall N 1520450198 0.85 % 735360659 0.82 % 785089539 0.87 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9887663008824452
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 592984957



Mapping Quality

Mapping Quality Histogram
A54770_3_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A54770_3_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
C7P5HANXX_4_1
C7NETANXX_1_1
C7P5HANXX_3_1