{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 92234412, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 88072055, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.49, 
            "paired": 92234412, 
            "paired_qc_failed": 0, 
            "read1": 46117206, 
            "read1_qc_failed": 0, 
            "read2": 46117206, 
            "read2_qc_failed": 0, 
            "paired_properly": 87168228, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.51, 
            "with_itself": 87717927, 
            "with_itself_qc_failed": 0, 
            "singletons": 354128, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.38, 
            "diff_chroms": 292871, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 145469574, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 141586568, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.33, 
            "paired": 145469574, 
            "paired_qc_failed": 0, 
            "read1": 72734787, 
            "read1_qc_failed": 0, 
            "read2": 72734787, 
            "read2_qc_failed": 0, 
            "paired_properly": 139229482, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.71, 
            "with_itself": 140814697, 
            "with_itself_qc_failed": 0, 
            "singletons": 771871, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.53, 
            "diff_chroms": 836459, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 39303897, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 416622, 
            "paired_opt_dupes": 1449, 
            "dupes_pct": 0.0106
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 60565195, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 282279, 
            "paired_opt_dupes": 2180, 
            "dupes_pct": 0.004661
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 39298226, 
            "distinct_read_pairs": 38881664, 
            "one_read_pair": 38469335, 
            "two_read_pair": 408134, 
            "NRF": 0.9894, 
            "PBC1": 0.989395, 
            "PBC2": 94.256629
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 60530190, 
            "distinct_read_pairs": 60248362, 
            "one_read_pair": 59967875, 
            "two_read_pair": 279160, 
            "NRF": 0.995344, 
            "PBC1": 0.995344, 
            "PBC2": 214.815428
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 77774550, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 77774550, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 77774550, 
            "paired_qc_failed": 0, 
            "read1": 38887275, 
            "read1_qc_failed": 0, 
            "read2": 38887275, 
            "read2_qc_failed": 0, 
            "paired_properly": 77774550, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 77774550, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 120565832, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 120565832, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 120565832, 
            "paired_qc_failed": 0, 
            "read1": 60282916, 
            "read1_qc_failed": 0, 
            "read2": 60282916, 
            "read2_qc_failed": 0, 
            "paired_properly": 120565832, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 120565832, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 35750, 
        "Np": 0, 
        "N_opt": 35750, 
        "N_consv": 35750, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 185, 
            "corr_est_frag_len": 0.280641828291055, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2729941, 
            "argmin_corr": 1500, 
            "min_corr": 0.1820083, 
            "NSC": 1.541918, 
            "RSC": 1.084055
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.384019485791
        }, 
        "rep1-pr1": {
            "FRiP": 0.381178625422
        }, 
        "rep1-pr2": {
            "FRiP": 0.38122532513
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.374570430562
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.194315086528, 
            "auc": 0.49539103985, 
            "ch_div": 0.111180863081, 
            "elbow_pt": 0.0, 
            "jsd": 0.790779411618, 
            "syn_auc": 0.502982959178, 
            "syn_elbow_pt": 0.364206982432, 
            "syn_jsd": 0.467130962122
        }
    ]
}
