{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 175837262, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 161641916, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 91.93, 
            "paired": 175837262, 
            "paired_qc_failed": 0, 
            "read1": 87918631, 
            "read1_qc_failed": 0, 
            "read2": 87918631, 
            "read2_qc_failed": 0, 
            "paired_properly": 156894508, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 89.23, 
            "with_itself": 159357544, 
            "with_itself_qc_failed": 0, 
            "singletons": 2284372, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.3, 
            "diff_chroms": 878601, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 145469574, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 141586568, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.33, 
            "paired": 145469574, 
            "paired_qc_failed": 0, 
            "read1": 72734787, 
            "read1_qc_failed": 0, 
            "read2": 72734787, 
            "read2_qc_failed": 0, 
            "paired_properly": 139229482, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.71, 
            "with_itself": 140814697, 
            "with_itself_qc_failed": 0, 
            "singletons": 771871, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.53, 
            "diff_chroms": 836459, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 58653003, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 373026, 
            "paired_opt_dupes": 2370, 
            "dupes_pct": 0.00636
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 60565195, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 282279, 
            "paired_opt_dupes": 2180, 
            "dupes_pct": 0.004661
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 58649766, 
            "distinct_read_pairs": 58276761, 
            "one_read_pair": 57913258, 
            "two_read_pair": 355662, 
            "NRF": 0.99364, 
            "PBC1": 0.993762, 
            "PBC2": 162.83229
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 60530190, 
            "distinct_read_pairs": 60248362, 
            "one_read_pair": 59967875, 
            "two_read_pair": 279160, 
            "NRF": 0.995344, 
            "PBC1": 0.995344, 
            "PBC2": 214.815428
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 116559954, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 116559954, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 116559954, 
            "paired_qc_failed": 0, 
            "read1": 58279977, 
            "read1_qc_failed": 0, 
            "read2": 58279977, 
            "read2_qc_failed": 0, 
            "paired_properly": 116559954, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 116559954, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 120565832, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 120565832, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 120565832, 
            "paired_qc_failed": 0, 
            "read1": 60282916, 
            "read1_qc_failed": 0, 
            "read2": 60282916, 
            "read2_qc_failed": 0, 
            "paired_properly": 120565832, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 120565832, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 135389, 
        "Np": 0, 
        "N_opt": 135389, 
        "N_consv": 135389, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 115, 
            "corr_est_frag_len": 0.200494406722009, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2454436, 
            "argmin_corr": 1500, 
            "min_corr": 0.1888828, 
            "NSC": 1.061475, 
            "RSC": 0.2052941
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.186668893626
        }, 
        "rep1-pr1": {
            "FRiP": 0.167324224362
        }, 
        "rep1-pr2": {
            "FRiP": 0.167489990864
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.121467440512
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.289868886432, 
            "auc": 0.496235413003, 
            "ch_div": 0.0923558283435, 
            "elbow_pt": 0.0, 
            "jsd": 0.60043983726, 
            "syn_auc": 0.502130089721, 
            "syn_elbow_pt": 0.0834111071869, 
            "syn_jsd": 0.272698518547
        }
    ]
}
