{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 91248126, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 88898156, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.42, 
            "paired": 91248126, 
            "paired_qc_failed": 0, 
            "read1": 45624063, 
            "read1_qc_failed": 0, 
            "read2": 45624063, 
            "read2_qc_failed": 0, 
            "paired_properly": 87749976, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.17, 
            "with_itself": 88563642, 
            "with_itself_qc_failed": 0, 
            "singletons": 334514, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.37, 
            "diff_chroms": 487081, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 136200922, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 132760866, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.47, 
            "paired": 136200922, 
            "paired_qc_failed": 0, 
            "read1": 68100461, 
            "read1_qc_failed": 0, 
            "read2": 68100461, 
            "read2_qc_failed": 0, 
            "paired_properly": 130688000, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.95, 
            "with_itself": 132096613, 
            "with_itself_qc_failed": 0, 
            "singletons": 664253, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.49, 
            "diff_chroms": 663242, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 40032450, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 183694, 
            "paired_opt_dupes": 1851, 
            "dupes_pct": 0.004589
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 56907844, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 250818, 
            "paired_opt_dupes": 2178, 
            "dupes_pct": 0.004407
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 40029538, 
            "distinct_read_pairs": 39845863, 
            "one_read_pair": 39662955, 
            "two_read_pair": 182144, 
            "NRF": 0.995412, 
            "PBC1": 0.99541, 
            "PBC2": 217.756034
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 56865752, 
            "distinct_read_pairs": 56615485, 
            "one_read_pair": 56366456, 
            "two_read_pair": 247819, 
            "NRF": 0.995599, 
            "PBC1": 0.995601, 
            "PBC2": 227.450099
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 79697512, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 79697512, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 79697512, 
            "paired_qc_failed": 0, 
            "read1": 39848756, 
            "read1_qc_failed": 0, 
            "read2": 39848756, 
            "read2_qc_failed": 0, 
            "paired_properly": 79697512, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 79697512, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 113314052, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 113314052, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 113314052, 
            "paired_qc_failed": 0, 
            "read1": 56657026, 
            "read1_qc_failed": 0, 
            "read2": 56657026, 
            "read2_qc_failed": 0, 
            "paired_properly": 113314052, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 113314052, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 192371, 
        "Np": 0, 
        "N_opt": 192371, 
        "N_consv": 192371, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 175, 
            "corr_est_frag_len": 0.189257285587428, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.194236, 
            "argmin_corr": 1500, 
            "min_corr": 0.1797578, 
            "NSC": 1.052846, 
            "RSC": 0.6561206
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.390354150442
        }, 
        "rep1-pr1": {
            "FRiP": 0.35400552489
        }, 
        "rep1-pr2": {
            "FRiP": 0.354181796845
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.31668121983
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.202720622532, 
            "auc": 0.495448162833, 
            "ch_div": 0.132617870445, 
            "elbow_pt": 0.0, 
            "jsd": 0.69355383665, 
            "syn_auc": 0.506301913617, 
            "syn_elbow_pt": 0.222287328721, 
            "syn_jsd": 0.399400539898
        }
    ]
}