/cemt/A54779_3_lane_gembs/C7NH5ANXX_4_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 558293254 | 100.00 % | 279146627 | 100.00 % | 279146627 | 100.00 % |
| General Reads | 533466080 | 95.55 % | 267024625 | 95.66 % | 266441455 | 95.45 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 15754134 | 2.82 % | 7877591 | 2.82 % | 7876543 | 2.82 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9073040 | 1.63 % | 4244411 | 1.52 % | 4828629 | 1.73 % |
| Bisulfite_reads C2T | 279588032 | 50.08 % | 139927169 | 50.13 % | 139660863 | 50.03 % |
| Bisulfite_reads G2A | 269632182 | 48.30 % | 134975047 | 48.35 % | 134657135 | 48.24 % |
| Concept | Value |
|---|---|
| Unique Fragments | 202484053 |
| Average Unique | 72.54 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 27895274153 | 39.65 % | 13014290431 | 37.00 % | 14880983722 | 42.31 % |
| Base Counts Overall C | 7082300808 | 10.07 % | 311637069 | 0.89 % | 6770663739 | 19.25 % |
| Base Counts Overall G | 7259061796 | 10.32 % | 6843978348 | 19.46 % | 415083448 | 1.18 % |
| Base Counts Overall T | 27541318807 | 39.15 % | 14714725756 | 41.84 % | 12826593051 | 36.47 % |
| Base Counts Overall N | 566994440 | 0.81 % | 287843398 | 0.82 % | 279151042 | 0.79 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9917193143216921 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 231056309 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 279146627 |
| 125 | 279146627 |
| Insert Size Histogram |
|---|
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