/EXTERNAL Roadmap/K006548_K006549_K006550_K006551_4_lane_gembs/SRX101206_4_lanes

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SAMPLE K006548_K006549_K006550_K006551_4_lane_gembs LANE SRX101206_4_lanes

Mapping Stats (Reads)

Concept	Total Reads	%	Pair One Reads	%	Pair Two Reads	%
Sequenced Reads	358978011	100.00 %	358978011	100.00 %	0	0.00 %
General Reads	352062098	98.07 %	352062098	98.07 %	0	0.00 %
Reads in Control sequences	0	0.00 %	0	0.00 %	0	0.00 %
Reads under conversion control	1451694	0.40 %	1451694	0.40 %	0	0.00 %
Reads over conversion control	0	0.00 %	0	0.00 %	0	0.00 %
Unmapped reads	5464219	1.52 %	5464219	1.52 %	0	0.00 %
Bisulfite_reads C2T	178549639	49.74 %	178549639	49.74 %	0	0.00 %
Bisulfite_reads G2A	174964153	48.74 %	174964153	48.74 %	0	0.00 %

Uniqueness (Fragments)

Concept	Value
Unique Fragments	305990672
Average Unique	86.56 %

Mapping Stats (Bases)

Concept	Total Bases	%	Pair One Bases	%	Pair Two Bases	%
Base Counts Overall A	11286787430	30.90 %
Base Counts Overall C	412746897	1.13 %
Base Counts Overall G	8119700225	22.23 %
Base Counts Overall T	16345927855	44.75 %
Base Counts Overall N	363379287	0.99 %

Bisulfite Conversion Rate

Bisulfite Conversion Type	Conversion Rate
Conversion Rate	0.9875181694468715
Over Conversion Rate	NA

Mapping Quality

Mapping Quality Histogram

Read Length

Read Length	Reads
100	87215428
101	271762583