/EXTERNAL Roadmap/K006548_K006549_K006550_K006551_4_lane_gembs/SRX101207_5_lanes

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SAMPLE K006548_K006549_K006550_K006551_4_lane_gembs LANE SRX101207_5_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 451627615 100.00 % 451627615 100.00 % 0 0.00 %
General Reads 443231397 98.14 % 443231397 98.14 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 1784073 0.40 % 1784073 0.40 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 6612145 1.46 % 6612145 1.46 % 0 0.00 %
Bisulfite_reads C2T 224690495 49.75 % 224690495 49.75 % 0 0.00 %
Bisulfite_reads G2A 220324975 48.78 % 220324975 48.78 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 386157980
Average Unique 86.77 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 14261775661 31.02 %
Base Counts Overall C 514992580 1.12 %
Base Counts Overall G 10148907548 22.07 %
Base Counts Overall T 20598894501 44.80 %
Base Counts Overall N 455181974 0.99 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9873653110259889
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX101207_5_lanes.mapq.png



Read Length

Read Length Reads
100 86264466
101 365363149