/EXTERNAL Roadmap/K006548_K006549_K006550_K006551_4_lane_gembs/SRX101209_1_lanes

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SAMPLE K006548_K006549_K006550_K006551_4_lane_gembs LANE SRX101209_1_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 85080105 100.00 % 85080105 100.00 % 0 0.00 %
General Reads 83653150 98.32 % 83653150 98.32 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 331609 0.39 % 331609 0.39 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 1095346 1.29 % 1095346 1.29 % 0 0.00 %
Bisulfite_reads C2T 42484840 49.94 % 42484840 49.94 % 0 0.00 %
Bisulfite_reads G2A 41499919 48.78 % 41499919 48.78 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 72906948
Average Unique 86.81 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 2627638359 30.58 %
Base Counts Overall C 97381979 1.13 %
Base Counts Overall G 1940594299 22.58 %
Base Counts Overall T 3841899144 44.71 %
Base Counts Overall N 85576824 1.00 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9884528679367899
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX101209_1_lanes.mapq.png



Read Length

Read Length Reads
100 85080105