{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 62737237, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 51061595, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 81.39, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 132967577, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 120327666, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 90.49, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 45105799, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 727964, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.016139
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 101662952, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2166997, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.021316
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 45105423, 
            "distinct_read_pairs": 44509697, 
            "one_read_pair": 43964234, 
            "two_read_pair": 530570, 
            "NRF": 0.986793, 
            "PBC1": 0.987745, 
            "PBC2": 82.862269
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 101616265, 
            "distinct_read_pairs": 99902404, 
            "one_read_pair": 98381677, 
            "two_read_pair": 1482009, 
            "NRF": 0.983134, 
            "PBC1": 0.984778, 
            "PBC2": 66.383994
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 44377835, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 44377835, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 99495955, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 99495955, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 35828, 
        "Np": 0, 
        "N_opt": 35828, 
        "N_consv": 35828, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 165, 
            "corr_est_frag_len": 0.178482807123621, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1873852, 
            "argmin_corr": 1500, 
            "min_corr": 0.1712136, 
            "NSC": 1.042457, 
            "RSC": 0.4495041
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.101697733145
        }, 
        "rep1-pr1": {
            "FRiP": 0.0913185001308
        }, 
        "rep1-pr2": {
            "FRiP": 0.091761837336
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0768671372403
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.296832385625, 
            "auc": 0.493840799284, 
            "ch_div": 0.104952118195, 
            "elbow_pt": 5.95324837714e-226, 
            "jsd": 0.572758351826, 
            "syn_auc": 0.496540713583, 
            "syn_elbow_pt": 0.11819742855, 
            "syn_jsd": 0.250960920956
        }
    ]
}