/EXTERNAL Roadmap/K006535_K006536_2_lane_gembs/SRX259093_3_lanes
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1182193614 | 100.00 % | 591096807 | 100.00 % | 591096807 | 100.00 % |
| General Reads | 1152680182 | 97.50 % | 578546388 | 97.88 % | 574133794 | 97.13 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 165 | 0.00 % | 85 | 0.00 % | 80 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 29513267 | 2.50 % | 12550334 | 2.12 % | 16962933 | 2.87 % |
| Bisulfite_reads C2T | 603623302 | 51.06 % | 303015589 | 51.26 % | 300607713 | 50.86 % |
| Bisulfite_reads G2A | 549057045 | 46.44 % | 275530884 | 46.61 % | 273526161 | 46.27 % |
| Concept | Value |
|---|---|
| Unique Fragments | 390072942 |
| Average Unique | 65.99 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 44104052255 | 36.94 % | 17707295687 | 29.66 % | 26396756568 | 44.22 % |
| Base Counts Overall C | 15358989817 | 12.86 % | 1077930190 | 1.81 % | 14281059627 | 23.92 % |
| Base Counts Overall G | 15651327727 | 13.11 % | 14631771311 | 24.51 % | 1019556416 | 1.71 % |
| Base Counts Overall T | 43086126257 | 36.09 % | 25684161683 | 43.02 % | 17401964574 | 29.15 % |
| Base Counts Overall N | 1201058958 | 1.01 % | 599618636 | 1.00 % | 601440322 | 1.01 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.016957802842026446 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 523684736 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 591096807 |
| 100 | 591096807 |
| Insert Size Histogram |
|---|
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