{
    "name": "Histone ChIP-Seq SE ENCSR004AKD with input ENCSR185URR", 
    "desc": "Histone ChIP-Seq SE ENCSR004AKD with input ENCSR185URR", 
    "flagstat_qc": [
        {
            "total": 91248225, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 80593462, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 88.32, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 139715220, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 128455158, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 91.94, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 59520013, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 10400768, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.174744
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 96485331, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 4640970, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.0481
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 59512144, 
            "distinct_read_pairs": 50167429, 
            "one_read_pair": 42686121, 
            "two_read_pair": 6088481, 
            "NRF": 0.842978, 
            "PBC1": 0.850873, 
            "PBC2": 7.010964
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 95887878, 
            "distinct_read_pairs": 92316153, 
            "one_read_pair": 88952767, 
            "two_read_pair": 3224723, 
            "NRF": 0.962751, 
            "PBC1": 0.963567, 
            "PBC2": 27.584623
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 49119245, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 49119245, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 91844361, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 91844361, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 68267, 
        "Np": 0, 
        "N_opt": 68267, 
        "N_consv": 68267, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 190, 
            "corr_est_frag_len": 0.257516852907171, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.2668465, 
            "argmin_corr": 1500, 
            "min_corr": 0.1933886, 
            "NSC": 1.331603, 
            "RSC": 0.8729936
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.426392577521
        }, 
        "rep1-pr1": {
            "FRiP": 0.408218276303
        }, 
        "rep1-pr2": {
            "FRiP": 0.4080794744
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.397801988468
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.158747773391, 
            "auc": 0.491648182699, 
            "ch_div": 0.162872017562, 
            "elbow_pt": 3.07233391797e-122, 
            "jsd": 0.779092643019, 
            "syn_auc": 0.505105385769, 
            "syn_elbow_pt": 0.39529085395, 
            "syn_jsd": 0.484862925257
        }
    ]
}