{
    "name": "Histone ChIP-Seq SE ENCSR381EFC;ENCSR858LJY with input ENCSR020OIW;ENCSR806RVF", 
    "desc": "Histone ChIP-Seq SE ENCSR381EFC;ENCSR858LJY with input ENCSR020OIW;ENCSR806RVF", 
    "flagstat_qc": [
        {
            "total": 93165760, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 88609333, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.11, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 114961222, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 109164923, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.96, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 66659634, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 11045512, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.1657
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 81858937, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 6474623, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.079095
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 66649096, 
            "distinct_read_pairs": 56703249, 
            "one_read_pair": 48145257, 
            "two_read_pair": 7358036, 
            "NRF": 0.850773, 
            "PBC1": 0.849074, 
            "PBC2": 6.543221
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 81767458, 
            "distinct_read_pairs": 75977555, 
            "one_read_pair": 70713038, 
            "two_read_pair": 4817385, 
            "NRF": 0.929191, 
            "PBC1": 0.93071, 
            "PBC2": 14.678718
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 55614122, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 55614122, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 75384314, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 75384314, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 27408, 
        "Np": 0, 
        "N_opt": 27408, 
        "N_consv": 27408, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 280, 
            "corr_est_frag_len": 0.172231942943023, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1814327, 
            "argmin_corr": 1500, 
            "min_corr": 0.1688356, 
            "NSC": 1.020116, 
            "RSC": 0.2696134
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0853935320121
        }, 
        "rep1-pr1": {
            "FRiP": 0.0669700218311
        }, 
        "rep1-pr2": {
            "FRiP": 0.0670194057445
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.053296957184
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.300989895113, 
            "auc": 0.492136253863, 
            "ch_div": 0.122796284523, 
            "elbow_pt": 4.70745805141e-138, 
            "jsd": 0.526992390709, 
            "syn_auc": 0.492918075508, 
            "syn_elbow_pt": 0.0706989986168, 
            "syn_jsd": 0.225731453103
        }
    ]
}
