/EXTERNAL Roadmap/K006559_K006560_K006561_K006562_K006563_5_lane_gembs

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SAMPLE K006559_K006560_K006561_K006562_K006563_5_lane_gembs




Mapping Stats (Reads)

Concept Total Reads %
Sequenced Reads 1982672531 100.00 %
General Reads 1672306524 84.35 %
Reads in Control sequences 0 0.00 %
Reads under conversion control 6397567 0.32 %
Reads over conversion control 0 0.00 %
Unmapped reads 303968440 15.33 %
Bisulfite_reads C2T 848589489 42.80 %
Bisulfite_reads G2A 830114602 41.87 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 1212461798
Average Unique 72.23 %



Mapping Stats (Bases)

Concept Total Bases %
Base Counts Overall A 51155141695 30.75 %
Base Counts Overall C 4560385723 2.74 %
Base Counts Overall G 39422260934 23.70 %
Base Counts Overall T 68383385939 41.11 %
Base Counts Overall N 2822168871 1.70 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9165347426189993
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
K006559_K006560_K006561_K006562_K006563_5_lane_gembs.mapq.png



Mapping Lanes Reports

LANE REPORTS
SRX006241_2_lanes
SRX006782_63_lanes
SRX006240_42_lanes
SRX006789_57_lanes
SRX006239_43_lanes