/EXTERNAL Roadmap/K006559_K006560_K006561_K006562_K006563_5_lane_gembs/SRX006239_43_lanes

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SAMPLE K006559_K006560_K006561_K006562_K006563_5_lane_gembs LANE SRX006239_43_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 570423799 100.00 % 570423799 100.00 % 0 0.00 %
General Reads 475344618 83.33 % 475344618 83.33 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 1164386 0.20 % 1164386 0.20 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 93914795 16.46 % 93914795 16.46 % 0 0.00 %
Bisulfite_reads C2T 241373953 42.31 % 241373953 42.31 % 0 0.00 %
Bisulfite_reads G2A 235135051 41.22 % 235135051 41.22 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 341922573
Average Unique 71.76 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 15098566160 30.08 %
Base Counts Overall C 1292191477 2.57 %
Base Counts Overall G 12286739008 24.48 %
Base Counts Overall T 20609020161 41.06 %
Base Counts Overall N 910777506 1.81 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9286493206431579
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX006239_43_lanes.mapq.png



Read Length

Read Length Reads
87 570423799