/EXTERNAL Roadmap/K006559_K006560_K006561_K006562_K006563_5_lane_gembs/SRX006782_63_lanes

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SAMPLE K006559_K006560_K006561_K006562_K006563_5_lane_gembs LANE SRX006782_63_lanes

Mapping Stats (Reads)

Concept	Total Reads	%	Pair One Reads	%	Pair Two Reads	%
Sequenced Reads	446994245	100.00 %	446994245	100.00 %	0	0.00 %
General Reads	417223465	93.34 %	417223465	93.34 %	0	0.00 %
Reads in Control sequences	0	0.00 %	0	0.00 %	0	0.00 %
Reads under conversion control	2114530	0.47 %	2114530	0.47 %	0	0.00 %
Reads over conversion control	0	0.00 %	0	0.00 %	0	0.00 %
Unmapped reads	27656250	6.19 %	27656250	6.19 %	0	0.00 %
Bisulfite_reads C2T	211395002	47.29 %	211395002	47.29 %	0	0.00 %
Bisulfite_reads G2A	207942993	46.52 %	207942993	46.52 %	0	0.00 %

Uniqueness (Fragments)

Concept	Value
Unique Fragments	315165683
Average Unique	75.16 %

Mapping Stats (Bases)

Concept	Total Bases	%	Pair One Bases	%	Pair Two Bases	%
Base Counts Overall A	11995937685	32.94 %
Base Counts Overall C	972477808	2.67 %
Base Counts Overall G	7931024579	21.78 %
Base Counts Overall T	14978863817	41.14 %
Base Counts Overall N	535372962	1.47 %

Bisulfite Conversion Rate

Bisulfite Conversion Type	Conversion Rate
Conversion Rate	0.9032256193076972
Over Conversion Rate	NA

Mapping Quality

Mapping Quality Histogram

Read Length

Read Length	Reads
88	160866029
76	193638838
53	28019280
87	64470098