/EXTERNAL Roadmap/K006559_K006560_K006561_K006562_K006563_5_lane_gembs/SRX006789_57_lanes

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SAMPLE K006559_K006560_K006561_K006562_K006563_5_lane_gembs LANE SRX006789_57_lanes

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 416770291 100.00 % 416770291 100.00 % 0 0.00 %
General Reads 380879589 91.39 % 380879589 91.39 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 2132650 0.51 % 2132650 0.51 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 33758052 8.10 % 33758052 8.10 % 0 0.00 %
Bisulfite_reads C2T 193222102 46.36 % 193222102 46.36 % 0 0.00 %
Bisulfite_reads G2A 189790137 45.54 % 189790137 45.54 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 266572941
Average Unique 69.60 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 10010336166 31.81 %
Base Counts Overall C 858220727 2.73 %
Base Counts Overall G 7213180011 22.92 %
Base Counts Overall T 12918692385 41.06 %
Base Counts Overall N 465333462 1.48 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9222161922658023
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
SRX006789_57_lanes.mapq.png



Read Length

Read Length Reads
76 390705722
52 26064569